BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006G11LP1|AL425593
(751 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig155 683 0.0
>3x_Contig155
Length = 970
Score = 683 bits (344), Expect = 0.0
Identities = 352/354 (99%), Gaps = 1/354 (0%)
Strand = Plus / Minus
Query: 3 tcgtgaaatagtttcaaatgtc-gctgtcaccgctagagatgtgctatggtacatcccaa 61
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 355 tcgtgaaatagtttcaaatgtccgctgtcaccgctagagatgtgctatggtacatcccaa 296
Query: 62 accagatagggtatgtgcgtgtggtgacgatgtgtttatcgttggttttgatggccaagc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 accagatagggtatgtgcgtgtggtgacgatgtgtttatcgttggttttgatggccaagc 236
Query: 122 atccgttgtggacgatggtagtgtatggagtgtcttgtttgttagatgcactagatggga 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 atccgttgtggacgatggtagtgtatggagtgtcttgtttgttagatgcactagatggga 176
Query: 182 caatggcacgtaagtdcggccagatcagttcattcggtgctgtgctggatatggtgacag 241
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 caatggcacgtaagtacggccagatcagttcattcggtgctgtgctggatatggtgacag 116
Query: 242 atagatccaccaccacagcattgatctgtttcctatgcgtggcatatccggtatggtcgc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 atagatccaccaccacagcattgatctgtttcctatgcgtggcatatccggtatggtcgc 56
Query: 302 ccgtgttccaactactagttgccttggacatttcaagccactatatccacatgt 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 ccgtgttccaactactagttgccttggacatttcaagccactatatccacatgt 2
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6166
Number of Sequences: 1807
Number of extensions: 6166
Number of successful extensions: 14
Number of sequences better than 1.0e-20: 1
length of query: 751
length of database: 10,358,551
effective HSP length: 16
effective length of query: 735
effective length of database: 10,329,639
effective search space: 7592284665
effective search space used: 7592284665
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)